Pasteurella multocida
Isolate MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers FDAARGOS_219
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 5.89%
CheckM Strain Heterogeneity 94.29
5S Count 5
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 13
N50 Contigs 1,950,520 bp
Longest Contig 1,950,520 bp
Scaffold Count 13
N50 Scaffolds 1,950,520 bp
Longest Scaffold 1,950,520 bp
Genome Size 2,513,856 bp
Protein Count 2,394
Coding Density 87.25%
GC Percentage 40.41%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM208324v2
Assembly Type n/a
Bioproject PRJNA231221
Biosample SAMN04875556
Country None
Date 2018-1-19
Genbank Assembly Accession GCA_002083245.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,295
Refseq Category na
Seq Rel Date 2018/01/19
Spanned Gaps 0
Species Taxid 747
SSU Count 6
Submitter University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center
Taxid 747
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master NBTH00000000.2