GWC2-65-14 sp001797615
MAG HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__MBNT15; c__MBNT15; o__MBNT15; f__MBNT15; g__GWC2-65-14; s__GWC2-65-14 sp001797615
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Deltaproteobacteria; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Deltaproteobacteria; x__unclassified Deltaproteobacteria; x__unclassified Deltaproteobacteria (miscellaneous); s__Deltaproteobacteria bacterium GWC2_65_14
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.16%
CheckM Contamination 0.84%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 175
N50 Contigs 28,388 bp
Longest Contig 95,023 bp
Scaffold Count 67
N50 Scaffolds 54,640 bp
Longest Scaffold 123,423 bp
Genome Size 2,256,834 bp
Protein Count 2,213
Coding Density 91.21%
GC Percentage 66.35%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM179761v1
Assembly Type n/a
Bioproject PRJNA288027
Biosample SAMN04313909
Country USA: Rifle; CO
Date 2016-10-20
Genbank Assembly Accession GCA_001797615.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source Rifle well CD01 at time point 3 / C; 5m depth; 0.2 filter
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 2,164
Refseq Category na
Seq Rel Date 2016/10/20
Spanned Gaps 108
Species Taxid 1797820
SSU Count 1
Submitter Banfield Lab, University of California, Berkeley
Taxid 1797820
Total Gap Length 4703
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MGPV00000000.1