XYA2-FULL-35-8 sp001778235
MAG MQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Patescibacteria; c__ABY1; o__UBA11705; f__UBA11705; g__XYA2-FULL-35-8; s__XYA2-FULL-35-8 sp001778235
Filtered NCBI Taxonomy d__Bacteria; p__Candidatus Falkowbacteria; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__Bacteria candidate phyla; x__Patescibacteria group; x__Parcubacteria group; p__Candidatus Falkowbacteria; s__Candidatus Falkowbacteria bacterium RIFOXYD2_FULL_35_9
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 67.27%
CheckM Contamination 0.99%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 199
N50 Contigs 9,837 bp
Longest Contig 25,449 bp
Scaffold Count 60
N50 Scaffolds 20,507 bp
Longest Scaffold 45,141 bp
Genome Size 983,230 bp
Protein Count 999
Coding Density 84.56%
GC Percentage 35.09%
Ambiguous Bases 0
GTDB representative GCA_001778235.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM178031v1
Assembly Type n/a
Bioproject PRJNA288027
Biosample SAMN04314654
Country USA: Rifle; CO
Date 2016-10-19
Genbank Assembly Accession GCA_001780315.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source Rifle well CD01 at 16ft depth; 0.2 micron filter at time point D
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 1,005
Refseq Category na
Seq Rel Date 2016/10/19
Spanned Gaps 139
Species Taxid 1798008
SSU Count 1
Submitter Banfield Lab, University of California, Berkeley
Taxid 1798008
Total Gap Length 6750
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MFGP00000000.1