XYA2-FULL-47-19 sp001780275
MAG MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Patescibacteria; c__ABY1; o__BM507; f__UBA12075; g__XYA2-FULL-47-19; s__XYA2-FULL-47-19 sp001780275
Filtered NCBI Taxonomy d__Bacteria; p__Candidatus Falkowbacteria; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__Bacteria candidate phyla; x__Patescibacteria group; x__Parcubacteria group; p__Candidatus Falkowbacteria; s__Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_47_19
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 71.78%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 37
N50 Contigs 110,969 bp
Longest Contig 245,482 bp
Scaffold Count 25
N50 Scaffolds 130,723 bp
Longest Scaffold 245,482 bp
Genome Size 1,713,569 bp
Protein Count 1,570
Coding Density 87.33%
GC Percentage 46.38%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM178027v1
Assembly Type n/a
Bioproject PRJNA288027
Biosample SAMN04314348
Country USA: Rifle; CO
Date 2016-10-19
Genbank Assembly Accession GCA_001780275.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source Rifle well CD01 at 16ft depth; 0.2 micron filter at time point A
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 1,562
Refseq Category na
Seq Rel Date 2016/10/19
Spanned Gaps 12
Species Taxid 1797994
SSU Count 1
Submitter Banfield Lab, University of California, Berkeley
Taxid 1797994
Total Gap Length 333
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MFGB00000000.1