XYA2-FULL-47-19 sp001780275
MAG MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Patescibacteria; c__ABY1; o__BM507; f__UBA12075; g__XYA2-FULL-47-19; s__XYA2-FULL-47-19 sp001780275
Filtered NCBI Taxonomy d__Bacteria; p__Candidatus Falkowbacteria; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__Bacteria candidate phyla; x__Patescibacteria group; x__Parcubacteria group; p__Candidatus Falkowbacteria; s__Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_46_15
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 70.79%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 129
N50 Contigs 23,882 bp
Longest Contig 109,353 bp
Scaffold Count 45
N50 Scaffolds 51,550 bp
Longest Scaffold 128,675 bp
Genome Size 1,699,384 bp
Protein Count 1,566
Coding Density 85.48%
GC Percentage 46.37%
Ambiguous Bases 0
GTDB representative GCA_001780275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM177825v1
Assembly Type n/a
Bioproject PRJNA288027
Biosample SAMN04314589
Country USA: Rifle; CO
Date 2016-10-19
Genbank Assembly Accession GCA_001778255.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source Rifle well CD01 at 16ft depth; 0.2 micron filter at time point C
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 1,575
Refseq Category na
Seq Rel Date 2016/10/19
Spanned Gaps 84
Species Taxid 1798003
SSU Count 1
Submitter Banfield Lab, University of California, Berkeley
Taxid 1798003
Total Gap Length 4653
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MFGK00000000.1