XYA2-FULL-47-19 sp001780275
MAG MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Patescibacteria; c__ABY1; o__BM507; f__UBA12075; g__XYA2-FULL-47-19; s__XYA2-FULL-47-19 sp001780275
Filtered NCBI Taxonomy d__Bacteria; p__Candidatus Falkowbacteria; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__Bacteria candidate phyla; x__Patescibacteria group; x__Parcubacteria group; p__Candidatus Falkowbacteria; s__Candidatus Falkowbacteria bacterium RIFOXYB2_FULL_47_14
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 70.79%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 62
N50 Contigs 40,073 bp
Longest Contig 166,654 bp
Scaffold Count 35
N50 Scaffolds 71,444 bp
Longest Scaffold 179,316 bp
Genome Size 1,670,295 bp
Protein Count 1,532
Coding Density 86.95%
GC Percentage 46.40%
Ambiguous Bases 0
GTDB representative GCA_001780275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM177816v1
Assembly Type n/a
Bioproject PRJNA288027
Biosample SAMN04314424
Country USA: Rifle; CO
Date 2016-10-19
Genbank Assembly Accession GCA_001778165.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source Rifle well CD01 at 16ft depth; 0.2 micron filter at time point B
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 1,535
Refseq Category na
Seq Rel Date 2016/10/19
Spanned Gaps 27
Species Taxid 1797999
SSU Count 2
Submitter Banfield Lab, University of California, Berkeley
Taxid 1797999
Total Gap Length 1142
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MFGG00000000.1