XYA2-FULL-35-8 sp001778235
MAG MQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Patescibacteria; c__ABY1; o__UBA11705; f__UBA11705; g__XYA2-FULL-35-8; s__XYA2-FULL-35-8 sp001778235
Filtered NCBI Taxonomy d__Bacteria; p__Candidatus Falkowbacteria; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__Bacteria candidate phyla; x__Patescibacteria group; x__Parcubacteria group; p__Candidatus Falkowbacteria; s__Candidatus Falkowbacteria bacterium RIFOXYA2_FULL_35_8
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 63.53%
CheckM Contamination 1.98%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 135
N50 Contigs 12,032 bp
Longest Contig 64,375 bp
Scaffold Count 60
N50 Scaffolds 22,512 bp
Longest Scaffold 66,772 bp
Genome Size 986,500 bp
Protein Count 996
Coding Density 84.91%
GC Percentage 35.19%
Ambiguous Bases 0
GTDB representative GCA_001778235.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM177807v1
Assembly Type n/a
Bioproject PRJNA288027
Biosample SAMN04314344
Country USA: Rifle; CO
Date 2016-10-19
Genbank Assembly Accession GCA_001778075.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source Rifle well CD01 at 16ft depth; 0.2 micron filter at time point A
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 976
Refseq Category na
Seq Rel Date 2016/10/19
Spanned Gaps 75
Species Taxid 1797992
SSU Count 1
Submitter Banfield Lab, University of California, Berkeley
Taxid 1797992
Total Gap Length 3967
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MFFZ00000000.1