2-01-FULL-39-12-A sp001776905
MAG MQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Patescibacteria; c__Microgenomatia; o__Daviesbacterales; f__UBA10151; g__2-01-FULL-39-12-A; s__2-01-FULL-39-12-A sp001776905
Filtered NCBI Taxonomy d__Bacteria; p__Candidatus Daviesbacteria; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__Bacteria candidate phyla; x__Patescibacteria group; x__Microgenomates group; p__Candidatus Daviesbacteria; s__Candidatus Daviesbacteria bacterium RIFCSPLOWO2_01_FULL_39_12
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 71.76%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 71
N50 Contigs 26,101 bp
Longest Contig 69,727 bp
Scaffold Count 34
N50 Scaffolds 44,291 bp
Longest Scaffold 117,376 bp
Genome Size 1,004,025 bp
Protein Count 1,097
Coding Density 93.82%
GC Percentage 38.69%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM177690v1
Assembly Type n/a
Bioproject PRJNA288027
Biosample SAMN04315298
Country USA: Rifle; CO
Date 2016-10-18
Genbank Assembly Accession GCA_001776905.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source Rifle well FP-101 under low O2 conditions; 0.1 micron filter; full assembly
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 1,072
Refseq Category na
Seq Rel Date 2016/10/18
Spanned Gaps 37
Species Taxid 1797785
SSU Count 0
Submitter Banfield Lab, University of California, Berkeley
Taxid 1797785
Total Gap Length 1164
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MFDM00000000.1