2-01-FULL-39-12-A sp001776905
MAG MQ 23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Patescibacteria; c__Microgenomatia; o__Daviesbacterales; f__UBA10151; g__2-01-FULL-39-12-A; s__2-01-FULL-39-12-A sp001776905
Filtered NCBI Taxonomy d__Bacteria; p__Candidatus Daviesbacteria; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__Bacteria candidate phyla; x__Patescibacteria group; x__Microgenomates group; p__Candidatus Daviesbacteria; s__Candidatus Daviesbacteria bacterium RIFCSPHIGHO2_02_FULL_39_8
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 56.33%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 1
tRNA Count 16
Contig Count 136
N50 Contigs 7,959 bp
Longest Contig 24,177 bp
Scaffold Count 52
N50 Scaffolds 13,314 bp
Longest Scaffold 37,955 bp
Genome Size 635,368 bp
Protein Count 750
Coding Density 91.78%
GC Percentage 38.79%
Ambiguous Bases 0
GTDB representative GCA_001776905.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM177668v1
Assembly Type n/a
Bioproject PRJNA288027
Biosample SAMN04315532
Country USA: Rifle; CO
Date 2016-10-18
Genbank Assembly Accession GCA_001776685.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source Rifle well FP-101 under high O2 conditions; 0.2 micron filter; full assembly
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 727
Refseq Category na
Seq Rel Date 2016/10/18
Spanned Gaps 84
Species Taxid 1797772
SSU Count 0
Submitter Banfield Lab, University of California, Berkeley
Taxid 1797772
Total Gap Length 3038
Translation Table 11
tRNA Count (total) 31
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MFCZ00000000.1