Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Muribaculaceae; g__UBA7173; s__UBA7173 sp001701135
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Muribaculaceae; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Muribaculaceae; x__unclassified Muribaculaceae; s__Bacteroidales bacterium H3
NCBI Strain Identifiers H3
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 94.65%
CheckM Contamination 1.45%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 19
Contig Count 36
N50 Contigs 133,428 bp
Longest Contig 442,494 bp
Scaffold Count 30
N50 Scaffolds 133,428 bp
Longest Scaffold 442,494 bp
Genome Size 2,399,586 bp
Protein Count 2,035
Coding Density 90.23%
GC Percentage 54.27%
Ambiguous Bases 25
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM170113v1
Assembly Type n/a
Bioproject PRJNA313232
Biosample SAMN04517358
Country Denmark
Date 2016-08-09
Genbank Assembly Accession GCA_001701135.1
Genome Category MAG
Genome Representation full
Isolate H3
Isolation Source Feces
Latitude Longitude None
Molecule Count N/A
CDS Count N/A
Refseq Category na
Seq Rel Date 2016/08/09
Spanned Gaps 6
Species Taxid 1807751
SSU Count 0
Submitter University of Queensland
Taxid 1807751
Total Gap Length 200
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master DAAN00000000.1