Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Patescibacteria; c__Microgenomatia; o__UBA1400; f__UBA12028; g__UBA12028; s__UBA12028 sp001002285
Filtered NCBI Taxonomy d__Bacteria; p__; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__Bacteria candidate phyla; x__Patescibacteria group; x__Microgenomates group; x__unclassified Microgenomates group; s__Microgenomates group bacterium GW2011_GWA1_46_15
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 62.76%
CheckM Contamination 0.92%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 0
tRNA Count 19
Contig Count 21
N50 Contigs 79,201 bp
Longest Contig 136,988 bp
Scaffold Count 20
N50 Scaffolds 79,201 bp
Longest Scaffold 136,988 bp
Genome Size 824,487 bp
Protein Count 914
Coding Density 92.95%
GC Percentage 45.73%
Ambiguous Bases 0
GTDB representative GCA_001002285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM100229v1
Assembly Type n/a
Bioproject PRJNA273161
Biosample SAMN03319866
Country USA: Rifle; CO
Date 2015-5-7
Genbank Assembly Accession GCA_001002295.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source aquifer sediment
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 911
Refseq Category na
Seq Rel Date 2015/05/07
Spanned Gaps 1
Species Taxid 1618494
SSU Count 0
Submitter Banfield Lab, University of California, Berkeley
Taxid 1618494
Total Gap Length 52
Translation Table 11
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LCLW00000000.1