Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Patescibacteria; c__Microgenomatia; o__UBA1400; f__UBA12028; g__UBA12028; s__UBA12028 sp001002285
Filtered NCBI Taxonomy d__Bacteria; p__; c__; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__unclassified Bacteria; x__Bacteria candidate phyla; x__Patescibacteria group; x__Microgenomates group; x__unclassified Microgenomates group; s__Microgenomates group bacterium GW2011_GWC1_46_15
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 63.68%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 8
N50 Contigs 201,214 bp
Longest Contig 421,066 bp
Scaffold Count 8
N50 Scaffolds 201,214 bp
Longest Scaffold 421,066 bp
Genome Size 913,836 bp
Protein Count 991
Coding Density 92.99%
GC Percentage 45.39%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM100228v1
Assembly Type n/a
Bioproject PRJNA273161
Biosample SAMN03319867
Country USA: Rifle; CO
Date 2015-5-7
Genbank Assembly Accession GCA_001002285.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source aquifer sediment
Latitude Longitude 39.5369 N 107.7828 W
Molecule Count 0
Protein Count 986
Refseq Category na
Seq Rel Date 2015/05/07
Spanned Gaps 0
Species Taxid 1618526
SSU Count 0
Submitter Banfield Lab, University of California, Berkeley
Taxid 1618526
Total Gap Length 0
Translation Table 11
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LCLX00000000.1