Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; x__environmental samples; s__Streptococcus salivarius CAG:79
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000785515.1)
Genome Characteristics
CheckM Completeness 95.43%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 1
tRNA Count 12
Contig Count 440
N50 Contigs 12,054 bp
Longest Contig 63,147 bp
Scaffold Count 150
N50 Scaffolds 30,794 bp
Longest Scaffold 102,103 bp
Genome Size 1,889,579 bp
Protein Count 1,838
Coding Density 86.19%
GC Percentage 40.25%
Ambiguous Bases N/A
GTDB representative GCA_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name MGS79
Assembly Type n/a
Bioproject PRJEB1008
Biosample SAMEA3138791
Country None
Date 2013-7-17
Genbank Assembly Accession GCA_000438135.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source derived from human gut metagenome
Latitude Longitude None
Molecule Count N/A
CDS Count 1,668
Refseq Category na
Seq Rel Date 2013/07/17
Spanned Gaps 290
Species Taxid 1263109
SSU Count 0
Submitter DTU
Taxid 1263109
Total Gap Length 15659
Translation Table 11
tRNA Count (total) 18
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CBKD000000000.1