Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae; g__Eubacterium_E; s__Eubacterium_E hallii_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Eubacteriaceae; g__Eubacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Eubacteriaceae; g__Eubacterium; x__environmental samples; s__Eubacterium sp. CAG:146
NCBI Strain Identifiers
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 97.57%
CheckM Contamination 2.01%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 10
Contig Count 272
N50 Contigs 20,272 bp
Longest Contig 76,191 bp
Scaffold Count 173
N50 Scaffolds 34,633 bp
Longest Scaffold 123,120 bp
Genome Size 2,653,983 bp
Protein Count 2,360
Coding Density 85.64%
GC Percentage 37.79%
Ambiguous Bases 0
GTDB representative GCF_900209925.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name MGS146
Assembly Type n/a
Bioproject PRJEB722
Biosample SAMEA3138472
Country None
Date 2013-7-17
Genbank Assembly Accession GCA_000431695.1
Genome Category MAG
Genome Representation full
Isolate None
Isolation Source derived from human gut metagenome
Latitude Longitude None
Molecule Count 0
Protein Count 2,286
Refseq Category na
Seq Rel Date 2013/07/17
Spanned Gaps 99
Species Taxid 1262879
SSU Count 0
Submitter DTU
Taxid 1262879
Total Gap Length 4677
Translation Table 11
tRNA Count (total) 21
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CAXQ000000000.1