Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii; x__Vibrio campbellii PEL22A
NCBI Strain Identifiers PEL22A
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 93.86%
CheckM Contamination 1.09%
CheckM Strain Heterogeneity 42.86
5S Count 1
16S Count 2
23S Count 4
tRNA Count 17
Contig Count 319
N50 Contigs 504,501 bp
Longest Contig 2,436,796 bp
Scaffold Count 319
N50 Scaffolds 504,501 bp
Longest Scaffold 2,436,796 bp
Genome Size 5,064,254 bp
Protein Count 6,520
Coding Density 81.78%
GC Percentage 45.37%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM25234v2
Assembly Type n/a
Bioproject PRJNA78919
Biosample SAMN02471382
Country Brazil: Abrolhos Bank
Date 2012-3-8
Genbank Assembly Accession GCA_000252345.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source open ocean
Latitude Longitude None
Molecule Count 0
Protein Count 0
Refseq Category na
Seq Rel Date 2012/03/08
Spanned Gaps 0
Species Taxid 680
SSU Count 0
Submitter Federal University of Rio de Janeiro
Taxid 1126217
Total Gap Length 0
Translation Table None
tRNA Count (total) 0
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AHYY00000000.1